src/phpDocumentor/Compiler/Linker/Linker.php 1

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TODO 233 Can we find another solution for this?

src/phpDocumentor/Compiler/Pass/NamespaceTreeBuilder.php 1

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TODO 88 find out why this can happen. Some bug in the assembler?

src/phpDocumentor/Descriptor/Builder/Reflector/FunctionAssembler.php 1

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TODO 71 this looks like a potential bug. Have to investigate this!

src/phpDocumentor/Descriptor/FileDescriptor.php 1

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TODO 310 This is an item that needs to be done.

src/phpDocumentor/Descriptor/Interfaces/ArgumentInterface.php 1

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TODO 40 update link to point to the final destination for the PHPDoc Standard.

src/phpDocumentor/Descriptor/ProjectDescriptorBuilder.php 3

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TODO 165 Any change in the API Specification compared to a previous (cached) run should invalidate that cache.
TODO 168 The setVisibility call should purge the cache; but once we are here, cache has already been loaded..
TODO 182 This call should purge the cache; but once we are here, cache has already been loaded..

src/phpDocumentor/Guides/Handlers/RenderHandler.php 1

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TODO 58 This is a hack; I want to rework path handling for guides as the Environment, for example,

src/phpDocumentor/Pipeline/Stage/Transform.php 1

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TODO 157 the guides to need this, can we get rid of these lines?

src/phpDocumentor/Transformer/Writer/RenderGuide.php 1

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TODO 87 Extract this, as this code is dupplicated

src/phpDocumentor/Transformer/Writer/Twig.php 1

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TODO 200 replace env with origin filesystem, as this will help us to copy assets.